STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1243TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: ecs:ECs1547 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Asuc_1242
TIGRFAM: phage head-tail adaptor, putative; PFAM: phage head-tail adaptor putative; KEGG: dvl:Dvul_0865 phage head-tail adaptor, putative.
 
    0.943
Asuc_1252
PFAM: NLP/P60 protein; KEGG: stm:STM1046 probable tail assembly protein.
 
     0.864
Asuc_1251
PFAM: phage minor tail protein L; KEGG: nmc:NMC0867 putative phage-related protein.
 
     0.851
Asuc_1253
PFAM: bacteriophage lambda tail assembly I; KEGG: stm:STM0923 putative phage tail assembly protein.
 
    0.847
Asuc_1238
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ecv:APECO1_1024 putative phage portal protein.
 
     0.842
Asuc_1240
TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein HK97; KEGG: ecv:APECO1_1022 putative phage capsid protein.
 
    0.836
Asuc_1236
PFAM: phage Terminase; KEGG: ecv:APECO1_3890 bacteriophage V large terminase subunit.
 
     0.802
Asuc_1241
TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: ecv:APECO1_1021 hypothetical protein.
       0.794
Asuc_1245
Hypothetical protein.
       0.794
Asuc_1254
PFAM: Fibronectin type III domain protein; Protein of unknown function DUF1983; KEGG: nmc:NMC0870 Neisseria meningitidis phage 2120; ORF 4.
 
    0.791
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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