STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1278PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: msu:MS2364 HybA protein. (330 aa)    
Predicted Functional Partners:
Asuc_1279
PFAM: Polysulphide reductase NrfD; KEGG: msu:MS2362 hypothetical protein.
 
 0.982
Asuc_1277
TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; KEGG: msu:MS2365 Ni, Fe-hydrogenase I small subunit.
 
  
 0.875
Asuc_1282
KEGG: msu:MS2359 hypothetical protein.
 
    0.869
Asuc_1280
PFAM: nickel-dependent hydrogenase large subunit; KEGG: msu:MS2361 Ni, Fe-hydrogenase I large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
  
 0.861
Asuc_1281
TIGRFAM: hydrogenase maturation protease; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52 hydrogen uptake protein; KEGG: msu:MS2360 Ni, Fe-hydrogenase maturation factor.
 
  
 0.856
Asuc_1524
TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ecv:APECO1_670 putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 0.815
Asuc_1262
TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: msu:MS1028 cytochrome b subunit of formate dehydrogenase.
 
 
 0.795
Asuc_1265
Formate dehydrogenase; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: msu:MS0892 anaerobic dehydrogenases, typically selenocysteine-containing.
 
 
 0.706
Asuc_1264
TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: msu:MS0891 anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.689
Asuc_1283
TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: msu:MS2358 hydrogenase maturation factor.
       0.656
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.