STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1306PFAM: aldo/keto reductase; KEGG: mpe:MYPE4720 oxidoreductase-aldo/keto reductase family. (315 aa)    
Predicted Functional Partners:
Asuc_1308
PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein.
 
    0.732
Asuc_1305
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msu:MS2162 MdaB protein.
     
 0.647
Asuc_0591
PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS2190 alcohol dehydrogenase IV; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.593
Asuc_1307
Hypothetical protein.
       0.528
Asuc_2092
Flavodoxin; KEGG: msu:MS1208 flavodoxin.
 
    0.487
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.469
Asuc_0668
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.456
Asuc_1304
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msu:MS2163 FabG protein.
  
  
 0.452
Asuc_0770
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: msu:MS1843 parvulin-like peptidyl-prolyl isomerase.
  
 
 0.434
Asuc_0351
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: msu:MS0292 Hmp protein.
     
 0.415
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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