Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Asuc_1306PFAM: aldo/keto reductase; KEGG: mpe:MYPE4720 oxidoreductase-aldo/keto reductase family. (315 aa)    
Predicted Functional Partners:
Asuc_1308
PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein.
 
    0.742
Asuc_1305
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msu:MS2162 MdaB protein.
   
 
 0.628
Asuc_1307
Hypothetical protein.
       0.528
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.519
Asuc_0591
PFAM: iron-containing alcohol dehydrogenase; KEGG: msu:MS2190 alcohol dehydrogenase IV; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.467
Asuc_2092
Flavodoxin; KEGG: msu:MS1208 flavodoxin.
 
     0.457
Asuc_1304
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msu:MS2163 FabG protein.
  
  
 0.434
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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