STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1308PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein. (354 aa)    
Predicted Functional Partners:
Asuc_1289
PFAM: Carboxymuconolactone decarboxylase; KEGG: lla:L178933 hypothetical protein.
 
  
 0.976
Asuc_2073
PFAM: Carboxymuconolactone decarboxylase; KEGG: msu:MS0180 uncharacterized ACR, similar to gamma-carboxymuconolactone decarboxylase subunit.
 
  
 0.972
Asuc_0072
KEGG: msu:MS2129 hydrolases of the alpha/beta superfamily.
    0.790
Asuc_2092
Flavodoxin; KEGG: msu:MS1208 flavodoxin.
 
    0.785
Asuc_1307
Hypothetical protein.
       0.773
Asuc_1306
PFAM: aldo/keto reductase; KEGG: mpe:MYPE4720 oxidoreductase-aldo/keto reductase family.
 
    0.732
Asuc_0070
KEGG: msu:MS2127 hypothetical protein.
 
     0.586
Asuc_1309
KEGG: msu:MS2255 hypothetical protein.
 
     0.555
Asuc_2085
KEGG: msu:MS1397 hypothetical protein.
 
  
 0.528
Asuc_2087
KEGG: sus:Acid_2913 hypothetical protein.
 
  
 0.515
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.