STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1328TIGRFAM: glutaredoxin, GrxB family; PFAM: Glutathione S-transferase domain; glutaredoxin 2 domain protein; KEGG: msu:MS1052 glutaredoxin 2. (216 aa)    
Predicted Functional Partners:
Asuc_1714
TIGRFAM: tellurite resistance protein TehB; PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; Protein of unknown function DUF1971; KEGG: hit:NTHI1895 tellurite resistance protein.
  
    0.653
Asuc_0735
KEGG: msu:MS0344 hypothetical protein.
  
     0.629
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.
  
     0.574
Asuc_2047
KEGG: hso:HS_0622 hypothetical protein.
  
  
 0.554
Asuc_1844
PFAM: protein of unknown function DUF560; KEGG: hso:HS_0622 hypothetical protein.
  
  
 0.546
Asuc_1327
Fructosamine kinase; PFAM: aminoglycoside phosphotransferase; fructosamine kinase; KEGG: msu:MS1051 hypothetical protein.
  
    0.543
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr).
       0.470
Asuc_1503
Phosphatidylglycerophosphatase; PFAM: phosphoesterase PA-phosphatase related; KEGG: msu:MS1532 membrane-associated phospholipid phosphatase.
  
     0.443
Asuc_1628
PFAM: protein of unknown function DUF333; KEGG: nma:NMA0983 haemolysin.
  
     0.434
Asuc_2041
PFAM: Patatin; KEGG: hdu:HD0066 hypothetical protein.
  
     0.423
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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