STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1450PFAM: protein of unknown function DUF945; KEGG: msu:MS0897 hypothetical protein. (481 aa)    
Predicted Functional Partners:
Asuc_1781
KEGG: hdu:HD0607 hypothetical protein.
  
     0.762
Asuc_0999
KEGG: msu:MS0837 TorD protein.
  
     0.750
Asuc_2111
KEGG: msu:MS1757 membrane protein.
  
     0.748
Asuc_0932
DNA polymerase III psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.747
Asuc_0597
PFAM: Uncharacterized lipoprotein; KEGG: msu:MS0312 uncharacterized lipoprotein.
  
   
 0.726
Asuc_0538
PFAM: protein of unknown function DUF469; KEGG: msu:MS0319 hypothetical protein.
  
     0.708
bamC
NlpBDapX family lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.704
Asuc_0528
TIGRFAM: cell division protein FtsN; PFAM: Sporulation domain protein; KEGG: msu:MS0450 cell division protein.
  
     0.702
Asuc_0644
PFAM: protein of unknown function DUF997; KEGG: msu:MS1787 hypothetical protein.
  
     0.669
matP
Protein of unknown function DUF1047; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.657
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.