STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1534PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: msu:MS2163 FabG protein. (249 aa)    
Predicted Functional Partners:
Asuc_1535
PFAM: aldo/keto reductase; KEGG: msu:MS1422 Tas protein.
  
    0.694
Asuc_1533
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: msu:MS1429 hypothetical protein.
       0.644
Asuc_1532
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: msu:MS2139 putative NADPH-quinone reductase (modulator of drug activity B).
       0.628
Asuc_1531
KEGG: msu:MS1416 hypothetical protein.
       0.615
Asuc_2084
KEGG: ppe:PEPE_1799 hypothetical protein.
  
     0.532
Asuc_2086
PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: msu:MS1405 hypothetical protein.
  
     0.488
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.