STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1575PFAM: triosephosphate isomerase; phosphotransferase system PTS EIIB protein; KEGG: pmu:PM1640 triosephosphate isomerase. (357 aa)    
Predicted Functional Partners:
pgk
PFAM: phosphoglycerate kinase; KEGG: msu:MS0245 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
 0.984
Asuc_1027
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: msu:MS1739 glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 0.978
Asuc_1662
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.809
Asuc_0536
Fructose-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.795
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
  
 
 0.771
Asuc_1576
PFAM: cyclase family protein; KEGG: pmu:PM1641 hypothetical Synechocystis sp.
       0.768
Asuc_1577
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pmu:PM1642 hypothetical E.coli.
   
   0.760
Asuc_1578
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pmu:PM1643 unknown.
       0.756
Asuc_1383
PFAM: Phosphoglycerate mutase; KEGG: msu:MS1172 phosphoglycerate mutase/fructose-2, 6-bisphosphatase.
      
 0.739
Asuc_0169
PFAM: carbohydrate kinase FGGY; KEGG: yen:YE0824 glycerol kinase.
     
 0.736
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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