STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1642PFAM: restriction modification system DNA specificity domain; KEGG: gox:GOX2570 hypothetical protein. (188 aa)    
Predicted Functional Partners:
Asuc_1640
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: gox:GOX2569 type I restriction enzyme M protein.
 
 
 0.995
Asuc_1637
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.940
Asuc_1639
PFAM: restriction modification system DNA specificity domain; KEGG: bth:BT_4543 putative type I restriction enzyme specificity protein.
 
     0.875
Asuc_1641
KEGG: sbo:SBO_3734 DNA-damage-inducible protein.
 
     0.827
Asuc_1636
PFAM: protein of unknown function DUF45; KEGG: yps:YPTB3878 putative predicted metal-dependent hydrolase.
 
     0.792
Asuc_1453
KEGG: msu:MS1137 predicted ATP-dependent endonuclease of the OLD family.
  
    0.602
Asuc_1643
PFAM: alpha/beta hydrolase fold; KEGG: bcl:ABC1422 lysophospholipase.
       0.463
Asuc_0812
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: plu:plu4904 hypothetical protein.
  
    0.422
Asuc_1291
KEGG: msu:MS0982 hypothetical protein.
  
    0.422
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.