Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Asuc_0860 | Asuc_0978 | Asuc_0860 | Asuc_0978 | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases. | TIGRFAM: nitrite reductase, copper-containing; KEGG: msu:MS0876 SufI protein; Belongs to the multicopper oxidase family. | 0.615 |
| Asuc_0860 | Asuc_1652 | Asuc_0860 | Asuc_1652 | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases. | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.497 |
| Asuc_0978 | Asuc_0860 | Asuc_0978 | Asuc_0860 | TIGRFAM: nitrite reductase, copper-containing; KEGG: msu:MS0876 SufI protein; Belongs to the multicopper oxidase family. | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases. | 0.615 |
| Asuc_0978 | Asuc_1652 | Asuc_0978 | Asuc_1652 | TIGRFAM: nitrite reductase, copper-containing; KEGG: msu:MS0876 SufI protein; Belongs to the multicopper oxidase family. | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.555 |
| Asuc_1650 | Asuc_1651 | Asuc_1650 | Asuc_1651 | PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein. | PFAM: HpcH/HpaI aldolase; KEGG: msu:MS2103 PykF protein; Belongs to the HpcH/HpaI aldolase family. | 0.508 |
| Asuc_1650 | Asuc_1652 | Asuc_1650 | Asuc_1652 | PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein. | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.444 |
| Asuc_1650 | Asuc_1655 | Asuc_1650 | Asuc_1655 | PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein. | KEGG: lpl:lp_1348 hypothetical protein. | 0.455 |
| Asuc_1651 | Asuc_1650 | Asuc_1651 | Asuc_1650 | PFAM: HpcH/HpaI aldolase; KEGG: msu:MS2103 PykF protein; Belongs to the HpcH/HpaI aldolase family. | PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein. | 0.508 |
| Asuc_1651 | Asuc_1652 | Asuc_1651 | Asuc_1652 | PFAM: HpcH/HpaI aldolase; KEGG: msu:MS2103 PykF protein; Belongs to the HpcH/HpaI aldolase family. | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.664 |
| Asuc_1652 | Asuc_0860 | Asuc_1652 | Asuc_0860 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases. | 0.497 |
| Asuc_1652 | Asuc_0978 | Asuc_1652 | Asuc_0978 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | TIGRFAM: nitrite reductase, copper-containing; KEGG: msu:MS0876 SufI protein; Belongs to the multicopper oxidase family. | 0.555 |
| Asuc_1652 | Asuc_1650 | Asuc_1652 | Asuc_1650 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PFAM: protein of unknown function DUF419; KEGG: msu:MS0577 MmcQ protein. | 0.444 |
| Asuc_1652 | Asuc_1651 | Asuc_1652 | Asuc_1651 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PFAM: HpcH/HpaI aldolase; KEGG: msu:MS2103 PykF protein; Belongs to the HpcH/HpaI aldolase family. | 0.664 |
| Asuc_1652 | Asuc_1653 | Asuc_1652 | Asuc_1653 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: msu:MS2153 NemA protein. | 0.436 |
| Asuc_1652 | Asuc_1654 | Asuc_1652 | Asuc_1654 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | KEGG: msu:MS2154 hypothetical protein. | 0.430 |
| Asuc_1652 | Asuc_1655 | Asuc_1652 | Asuc_1655 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | KEGG: lpl:lp_1348 hypothetical protein. | 0.430 |
| Asuc_1652 | Asuc_1656 | Asuc_1652 | Asuc_1656 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PFAM: DSBA oxidoreductase; KEGG: msu:MS2155 hypothetical protein. | 0.425 |
| Asuc_1652 | hemH | Asuc_1652 | Asuc_1562 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.929 |
| Asuc_1652 | nfuA | Asuc_1652 | Asuc_0296 | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | HesB/YadR/YfhF-family protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.433 |
| Asuc_1653 | Asuc_1652 | Asuc_1653 | Asuc_1652 | PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: msu:MS2153 NemA protein. | Ferritin Dps family protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.436 |
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