STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1657PFAM: beta-lactamase domain protein; KEGG: msu:MS2011 GloB protein. (338 aa)    
Predicted Functional Partners:
Asuc_0006
TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: hso:HS_1497 glutathione-regulated potassium-efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
 0.488
Asuc_1086
PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: pmu:PM0271 hypothetical E.coli.
  
    0.455
Asuc_1656
PFAM: DSBA oxidoreductase; KEGG: msu:MS2155 hypothetical protein.
  
    0.409
Asuc_1653
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: msu:MS2153 NemA protein.
  
    0.408
Asuc_1654
KEGG: msu:MS2154 hypothetical protein.
       0.404
Asuc_1655
KEGG: lpl:lp_1348 hypothetical protein.
       0.404
Asuc_1658
PFAM: 2-nitropropane dioxygenase NPD; KEGG: sab:SAB1837 hypothetical protein.
       0.403
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.