STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1680Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msu:MS0763 transcriptional regulator. (312 aa)    
Predicted Functional Partners:
Asuc_1678
PFAM: branched-chain amino acid transport; KEGG: msu:MS0765 AzlD protein.
       0.792
Asuc_1679
PFAM: AzlC family protein; KEGG: hit:NTHI2047 predicted branched-chain amino acid permease.
       0.792
Asuc_1681
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS1583 ABC-type iron/thiamine transport systems, periplasmic component.
       0.522
Asuc_0080
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cvi:CV2939 probable transcriptional regulator.
  
     0.464
Asuc_1316
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_B1969 transcriptional regulator, LysR family.
  
     0.457
Asuc_0136
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_01500 putative transcriptional regulator.
  
     0.451
Asuc_1542
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msu:MS2116 LysR protein; Belongs to the LysR transcriptional regulatory family.
  
     0.423
Asuc_2095
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msu:MS1210 LysR protein; Belongs to the LysR transcriptional regulatory family.
  
     0.417
Asuc_1674
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: msu:MS1024 molybdopterin converting factor, large subunit.
       0.411
Asuc_1675
TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: hso:HS_1029 molybdopterin biosynthesis protein, D chain.
       0.411
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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