STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1723KEGG: msu:MS1222 Mug protein. (196 aa)    
Predicted Functional Partners:
Asuc_1722
PFAM: protein of unknown function UPF0181; KEGG: pmu:PM0480 unknown.
       0.773
Asuc_0773
PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: bam:Bamb_3834 YadA C-terminal domain protein.
  
     0.546
Asuc_1402
Putative permease; KEGG: hso:HS_0867 possible permease.
  
     0.538
Asuc_2047
KEGG: hso:HS_0622 hypothetical protein.
  
     0.523
Asuc_1844
PFAM: protein of unknown function DUF560; KEGG: hso:HS_0622 hypothetical protein.
  
     0.517
Asuc_2075
PFAM: O-methyltransferase domain protein; KEGG: pmu:PM1322 tetracenomycin C synthesis protein.
  
     0.507
Asuc_1393
KEGG: ecs:ECs4945 phage transposase.
  
     0.504
Asuc_1158
PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: msu:MS0748 hypothetical protein.
  
     0.503
Asuc_1379
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: hin:HI0041 exodeoxyribonuclease III.
  
 
 0.475
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.468
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.