STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1744Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0810 ABC-type spermidine/putrescine transport system, permease component II. (256 aa)    
Predicted Functional Partners:
Asuc_1745
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0811 ABC-type spermidine/putrescine transport system, permease component I.
 
0.999
Asuc_0432
PFAM: extracellular solute-binding protein family 1; KEGG: msu:MS2292 spermidine/putrescine-binding periplasmic protein.
 
 0.998
Asuc_1743
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.998
potA
Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 0.996
Asuc_1527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0583 ABC-type spermidine/putrescine transport system, permease component I.
 
  
 0.903
Asuc_1528
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0584 MalK protein; Belongs to the ABC transporter superfamily.
  
 0.762
fbpC
ABC transporter related; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
  
 0.749
Asuc_1715
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM1454 multiple sugar-binding transport ATP binding protein; Belongs to the ABC transporter superfamily.
  
 0.720
Asuc_1717
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pmu:PM1456 ATP-binding transport protein, putative; Belongs to the ABC transporter superfamily.
 
   
 0.616
Asuc_1747
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.432
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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