STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1754PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM0915 peptide ABC transporter, ATP-binding protein. (270 aa)    
Predicted Functional Partners:
Asuc_1756
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0854 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
Asuc_1755
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: msu:MS0853 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
0.993
Asuc_1757
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msu:MS0855 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.952
Asuc_1758
PFAM: extracellular solute-binding protein family 5; KEGG: msu:MS0856 ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components.
 
  
 0.943
Asuc_1668
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmu:PM0448 hypothetical Y. pestis.
 
    
0.888
Asuc_0300
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS1275 ABC-type polar amino acid transport system, ATPase component.
 
    
0.847
Asuc_1115
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: pmu:PM0678 oligopeptide-binding protein homolog, periplasmic, putative.
  
   
 0.643
Asuc_1759
PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: pmu:PM0910 hypothetical HI1637.
       0.572
Asuc_1821
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0794 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
     
0.477
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.