STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_1898PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: msu:MS0643 periplasmic sugar-binding proteins. (330 aa)    
Predicted Functional Partners:
Asuc_0860
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: msu:MS1730 sensory transduction histidine kinases.
  
 
 0.992
Asuc_1897
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: msu:MS0642 ABC-type sugar (aldose) transport system, ATPase component.
 
 0.981
Asuc_1896
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: msu:MS0641 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.980
Asuc_0491
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: msu:MS0061 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.642
Asuc_0172
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: eca:ECA1949 putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.620
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.613
Asuc_0083
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: msu:MS1610 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.568
Asuc_0196
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: pmu:PM0154 ribose transport system permease protein.
 
 
 0.568
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 
 0.556
araG
ABC transporter related; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
 
 
 0.546
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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