STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_2078PFAM: DSBA oxidoreductase; KEGG: msu:MS2007 FrnE protein. (227 aa)    
Predicted Functional Partners:
Asuc_2077
PFAM: phospholipase/Carboxylesterase; KEGG: ilo:IL0037 phospholipase/carboxylesterase family protein.
       0.773
Asuc_0805
PFAM: arsenate reductase and related; KEGG: msu:MS0672 ArsC protein; Belongs to the ArsC family.
   
   0.553
Asuc_2079
PFAM: helix-turn-helix HxlR type; KEGG: fnu:FN1232 transcriptional regulator, MarR family.
       0.553
Asuc_2076
KEGG: cth:Cthe_3139 hypothetical protein.
       0.428
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.