STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Asuc_2092Flavodoxin; KEGG: msu:MS1208 flavodoxin. (230 aa)    
Predicted Functional Partners:
Asuc_1308
PFAM: Carboxymuconolactone decarboxylase; Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein.
 
    0.785
Asuc_2091
Conserved hypothetical protein; KEGG: pmu:PM1936 unknown.
 
     0.774
Asuc_2093
PFAM: Carboxylesterase type B; KEGG: rle:pRL110316 putative exported carboxylesterase; Belongs to the type-B carboxylesterase/lipase family.
  
  
 0.681
Asuc_2094
PFAM: aldo/keto reductase; KEGG: ade:Adeh_3215 aldo/keto reductase.
 
    0.569
Asuc_0072
KEGG: msu:MS2129 hydrolases of the alpha/beta superfamily.
 
 
   0.549
Asuc_1705
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: msu:MS0731 GltD protein.
  
   0.490
Asuc_1306
PFAM: aldo/keto reductase; KEGG: mpe:MYPE4720 oxidoreductase-aldo/keto reductase family.
 
    0.487
Asuc_0062
PFAM: aldo/keto reductase; KEGG: ecv:APECO1_1695 2,5-diketo-D-gluconic acid reductase A.
 
    0.459
Asuc_0070
KEGG: msu:MS2127 hypothetical protein.
 
     0.445
Asuc_2089
PFAM: aldo/keto reductase; KEGG: tma:TM1009 oxidoreductase, aldo/keto reductase family.
 
    0.440
Your Current Organism:
Actinobacillus succinogenes
NCBI taxonomy Id: 339671
Other names: A. succinogenes 130Z, Actinobacillus succinogenes 130Z, Actinobacillus succinogenes str. 130Z, Actinobacillus succinogenes strain 130Z
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