STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQJ73777.1Peptide ABC transpoter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (566 aa)    
Predicted Functional Partners:
OQJ73776.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.792
OQJ71038.1
Type IV secretion system protein VirD4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
OQJ71045.1
Type IV secretion system protein VirB4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
OQJ71035.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
OQJ71047.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
OQJ73312.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
OQJ73718.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
OQJ73301.1
Antibiotic resistance protein VanZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
OQJ73775.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.462
OQJ72125.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.458
Your Current Organism:
Leuconostoc pseudomesenteroides
NCBI taxonomy Id: 33968
Other names: ATCC 12291, CCUG 30063, CIP 103316, DSM 20193, JCM 9696, KCTC 3652, L. pseudomesenteroides, LMG 11482, LMG:11482, NCCB 83005, NCDO 768, NCIMB 8699, strain 39, strain Moss 39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.