Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DltB | acpP | BMS77_08305 | BMS77_01675 | D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.806 |
| DltB | acpP-2 | BMS77_08305 | BMS77_03285 | D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.806 |
| DltB | dltA | BMS77_08305 | BMS77_08310 | D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane. | D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to [...] | 0.997 |
| OQJ73248.1 | OQJ73252.1 | BMS77_01640 | BMS77_01665 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| OQJ73248.1 | OQJ73253.1 | BMS77_01640 | BMS77_01670 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
| OQJ73248.1 | acpP | BMS77_01640 | BMS77_01675 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.791 |
| OQJ73248.1 | fabF | BMS77_01640 | BMS77_01655 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.929 |
| OQJ73248.1 | fabZ | BMS77_01640 | BMS77_01645 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.934 |
| OQJ73248.1 | fabZ-2 | BMS77_01640 | BMS77_01690 | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.746 |
| OQJ73252.1 | OQJ73248.1 | BMS77_01665 | BMS77_01640 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| OQJ73252.1 | OQJ73253.1 | BMS77_01665 | BMS77_01670 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| OQJ73252.1 | acpP | BMS77_01665 | BMS77_01675 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.945 |
| OQJ73252.1 | acpP-2 | BMS77_01665 | BMS77_03285 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.865 |
| OQJ73252.1 | dltA | BMS77_01665 | BMS77_08310 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-alanine--poly(phosphoribitol) ligase subunit 1; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to [...] | 0.785 |
| OQJ73252.1 | fabF | BMS77_01665 | BMS77_01655 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
| OQJ73252.1 | fabZ | BMS77_01665 | BMS77_01645 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.953 |
| OQJ73252.1 | fabZ-2 | BMS77_01665 | BMS77_01690 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.946 |
| OQJ73252.1 | rplU | BMS77_01665 | BMS77_05395 | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.413 |
| OQJ73253.1 | OQJ73248.1 | BMS77_01670 | BMS77_01640 | 2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.474 |
| OQJ73253.1 | OQJ73252.1 | BMS77_01670 | BMS77_01665 | 2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
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