STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_00272C2H2-type domain-containing protein. (919 aa)    
Predicted Functional Partners:
HCAG_07341
Nuclear cap-binding protein subunit 2.
    
 0.988
HCAG_06885
Uncharacterized protein.
   
 0.985
HCAG_05592
ATP-dependent RNA helicase DOB1.
   
 0.959
SUB2
ATP-dependent RNA helicase SUB2; ATP-binding RNA helicase involved in transcription elongation and required for the export of mRNA out of the nucleus. SUB2 plays also a role in pre-mRNA splicing and spliceosome assembly. May be involved in rDNA and telomeric silencing, and maintenance of genome integrity (By similarity); Belongs to the DEAD box helicase family. DECD subfamily.
 
 
 0.947
HCAG_04758
MI domain-containing protein.
   
 
  0.930
HCAG_02490
Uncharacterized protein.
   
 
  0.915
HCAG_03195
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
     
 0.915
HCAG_03306
Peptidyl-prolyl cis-trans isomerase cypE.
   
 
  0.915
HCAG_04267
PWI domain-containing protein.
   
 
  0.893
HCAG_00740
RRM domain-containing protein.
   
 0.747
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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