STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_00976Pre-mRNA splicing factor cef-1. (793 aa)    
Predicted Functional Partners:
HCAG_02506
Uncharacterized protein.
   
 0.999
HCAG_03437
Pre-mRNA splicing factor prp46.
   
 0.999
HCAG_05496
Uncharacterized protein.
   
 0.999
HCAG_07308
Uncharacterized protein.
   
 0.999
HCAG_03365
Uncharacterized protein.
   
 
 0.995
HCAG_00461
SKIP_SNW domain-containing protein.
   
 
 0.994
HCAG_02641
Pre-mRNA splicing factor syf-1.
   
 
 0.994
HCAG_07796
WD_REPEATS_REGION domain-containing protein.
   
 
 0.994
HCAG_00813
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.993
HCAG_01349
Uncharacterized protein.
    
 
 0.993
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.