STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_01043Uncharacterized protein. (1110 aa)    
Predicted Functional Partners:
HCAG_01042
DDHD domain-containing protein.
 
     0.917
HCAG_03764
WD_REPEATS_REGION domain-containing protein.
    
 0.672
HCAG_08938
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.652
HCAG_04789
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.583
HCAG_05252
Uncharacterized protein.
     
 0.510
HCAG_04840
GTP-binding protein sarA; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.451
HCAG_05142
Protein transport protein sec22; Belongs to the synaptobrevin family.
     
 0.451
HCAG_03970
Uncharacterized protein.
   
 
  0.433
HCAG_03467
Uncharacterized protein.
   
 0.411
HCAG_03468
Uncharacterized protein.
   
 0.411
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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