STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_01122Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
HCAG_01123
VIT domain-containing protein.
 
     0.948
HCAG_08444
60S ribosomal protein L5.
    
 
 0.815
HCAG_02761
Brix domain-containing protein.
   
 
 0.787
HCAG_00062
Brix domain-containing protein.
   
    0.756
HCAG_04231
60S ribosomal protein L11-1; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.708
HCAG_06366
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.672
HCAG_01688
Utp12 domain-containing protein.
   
    0.652
HCAG_00460
Periodic tryptophan protein 2.
   
    0.651
HCAG_02175
Uncharacterized protein.
   
    0.651
HCAG_03933
NUC173 domain-containing protein.
   
  
 0.651
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.