STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_01455HTH La-type RNA-binding domain-containing protein. (1134 aa)    
Predicted Functional Partners:
HCAG_06026
Polyadenylate-binding protein.
   
 
 0.692
HCAG_00841
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43.
   
 
 0.590
HCAG_03047
Centromere/microtubule-binding protein cbf5.
   
 
 0.586
HCAG_05088
mRNA export factor elf1.
   
 
 0.530
HCAG_06478
RRM domain-containing protein.
   
 
 0.520
HCAG_07938
Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.469
HCAG_00995
Uncharacterized protein.
   
 
 0.466
HCAG_08209
MIF4G domain-containing protein.
   
 
 0.466
HCAG_08813
Uncharacterized protein.
   
 
 0.466
HCAG_01889
SUI1 domain-containing protein.
    
 
 0.455
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.