STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_01822RNB domain-containing protein. (1344 aa)    
Predicted Functional Partners:
HCAG_05387
KH_dom_type_1 domain-containing protein.
   
 0.916
HCAG_03457
ECR1_N domain-containing protein.
   
 0.914
HCAG_07214
Uncharacterized protein.
   
 0.912
HCAG_04484
RNase_PH domain-containing protein.
   
 0.911
HCAG_03200
RNase_PH domain-containing protein.
   
 0.909
HCAG_05804
Tr-type G domain-containing protein.
   
 0.898
HCAG_05940
RNase_PH domain-containing protein.
   
 0.880
HCAG_01501
Serine/threonine-protein kinase cot-1.
    
 
 0.873
HCAG_05592
ATP-dependent RNA helicase DOB1.
   
 0.855
HCAG_02509
Uncharacterized protein.
   
 0.807
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.