STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_02172Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
HCAG_01788
Sas10 domain-containing protein.
   
 0.998
HCAG_07125
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.990
HCAG_03539
U3 small nucleolar RNA-associated protein 22.
   
 0.988
HCAG_00829
Uncharacterized protein.
   
 
 0.984
RRP3
ATP-dependent rRNA helicase RRP3; ATP-dependent rRNA helicase required for pre-ribosomal RNA processing. Involved in the maturation of the 35S-pre-rRNA and to its cleavage to mature 18S rRNA.
  
0.975
HCAG_02441
WD_REPEATS_REGION domain-containing protein.
   
 0.974
HCAG_03776
WD_REPEATS_REGION domain-containing protein.
   
 
 0.972
HCAG_01922
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.967
HCAG_05902
Uncharacterized protein.
   
 
 0.966
HCAG_07649
PINc domain-containing protein.
   
 0.961
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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