STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_02894Rab-GAP TBC domain-containing protein. (892 aa)    
Predicted Functional Partners:
HCAG_00727
Uncharacterized protein.
 
      0.808
HCAG_01847
ADP-ribosylation factor.
    
 0.653
HCAG_01849
Uncharacterized protein.
    
 0.653
HCAG_01167
I/LWEQ domain-containing protein.
   
 
  0.612
HCAG_00598
AP-1 adaptor complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
 0.607
HCAG_05114
GTPase-activating protein GYP7.
      
 0.598
HCAG_00204
Uncharacterized protein.
   
 
  0.597
HCAG_05039
Uncharacterized protein.
     
 0.591
VPS10
Vacuolar protein sorting/targeting protein 10; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A. Executes multiple rounds of sorting by cycling between the late Golgi and a prevacuolar endosome-like compartment (By similarity); Belongs to the VPS10 family.
    
  0.588
HCAG_06017
Rab-GAP TBC domain-containing protein.
      
 0.577
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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