STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_02998Protein transport protein SEC61 alpha subunit. (479 aa)    
Predicted Functional Partners:
HCAG_03055
Ribosomal protein L23a.
  
 
 0.999
HCAG_03415
Uncharacterized protein.
  
 
 0.999
HCAG_07242
Uncharacterized protein.
   
 0.999
HCAG_08351
KOW domain-containing protein.
  
 
 0.999
HCAG_02327
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.998
HCAG_02704
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.997
HCAG_03679
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.997
HCAG_08444
60S ribosomal protein L5.
  
 
 0.997
HCAG_08706
60S ribosomal protein L7.
  
 
 0.997
HCAG_04830
Uncharacterized protein.
   
 0.996
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.