STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_03532Uncharacterized protein. (711 aa)    
Predicted Functional Partners:
HCAG_00841
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43.
    
 0.976
HCAG_01076
RNA helicase.
    
 0.943
PXR1
Protein PXR1; Involved in rRNA-processing at A0, A1 and A2 sites and regulates negatively telomerase; Belongs to the PINX1 family.
    
 
 0.942
HCAG_07049
RNA helicase.
    
  0.941
HCAG_03539
U3 small nucleolar RNA-associated protein 22.
   
 
 0.940
HCAG_07626
Bystin.
    
 
 0.939
HCAG_00829
Uncharacterized protein.
    
   0.938
HCAG_01788
Sas10 domain-containing protein.
    
   0.938
HCAG_01957
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
    
   0.938
HCAG_05451
Uncharacterized protein.
    
 
 0.938
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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