STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_03901CID domain-containing protein. (246 aa)    
Predicted Functional Partners:
HCAG_00490
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.973
HCAG_01366
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 
 0.969
HCAG_03903
Sad1-interacting factor 2.
 
      0.824
HCAG_03109
Protein kinase domain-containing protein.
    
 
 0.809
HCAG_05347
Protein kinase domain-containing protein.
    
 
 0.795
HCAG_00078
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.746
HCAG_03784
Uncharacterized protein.
   
 
 0.688
HCAG_06230
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
     
 0.588
HCAG_03525
Histone H2B; Belongs to the histone H2B family.
    
   0.527
HCAG_03899
Chloride channel protein.
 
      0.527
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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