STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_04108FAA_hydrolase domain-containing protein. (289 aa)    
Predicted Functional Partners:
HCAG_05721
Homogentisate 1,2-dioxygenase.
  
 
 0.734
HCAG_06934
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
 
      0.721
HCAG_05953
Tryptophan synthase.
     
 0.639
HCAG_00748
Anthranilate synthase component II.
  
  
 0.566
HCAG_07104
3-isopropylmalate dehydratase.
  
 
  0.535
HCAG_00765
Nitrate reductase.
  
  
 0.472
HCAG_07200
Uncharacterized protein.
  
  
 0.472
HCAG_06728
Spt3.
 
      0.448
HCAG_01683
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.428
HCAG_05719
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.428
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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