STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_04214Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (92 aa)    
Predicted Functional Partners:
HCAG_05505
Uncharacterized protein.
  
 0.993
HCAG_01666
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.989
HCAG_01947
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.989
HCAG_02704
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.989
HCAG_03993
Elongation factor 3.
  
 
 0.989
HCAG_04575
Ribosomal protein S16.
   
 0.989
HCAG_07961
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.989
HCAG_08073
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 0.989
HCAG_08092
40S ribosomal protein S17.
   
 0.989
HCAG_08821
Ribosomal protein S20.
  
 0.989
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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