STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_04765Uncharacterized protein. (979 aa)    
Predicted Functional Partners:
HCAG_01094
CPSF_A domain-containing protein.
    
 0.971
HCAG_04766
Uncharacterized protein.
 
      0.890
HCAG_02556
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.808
HCAG_02847
PCI domain-containing protein.
    
 0.697
HCAG_06434
COP9 signalosome complex subunit 5.
    
 0.672
HCAG_06215
WD_REPEATS_REGION domain-containing protein.
   
 
  0.663
HCAG_06972
Uncharacterized protein.
     
 0.657
HCAG_00486
Chromatin assembly factor 1 subunit C.
    
  0.656
HCAG_05300
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
     
 0.648
HCAG_06556
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
  0.634
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.