STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_04952Uncharacterized protein. (556 aa)    
Predicted Functional Partners:
HCAG_04525
Nsp1_C domain-containing protein.
   
 0.999
HCAG_07669
Uncharacterized protein.
   
 0.922
HCAG_07137
Uncharacterized protein.
   
 0.918
HCAG_03435
Nup54 domain-containing protein.
   
0.914
HCAG_01986
Poly(A)+ RNA export protein.
   
 0.913
HCAG_08938
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.913
HCAG_04437
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.912
HCAG_07102
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.911
HCAG_08819
ELYS domain-containing protein.
   
 0.871
HCAG_01771
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.793
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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