STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_0653460S ribosomal protein L43. (92 aa)    
Predicted Functional Partners:
HCAG_00055
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.999
HCAG_00164
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
HCAG_01666
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.999
HCAG_01793
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.999
HCAG_01947
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.999
HCAG_01981
Ribosomal_L6 domain-containing protein.
   
 
 0.999
HCAG_02186
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
HCAG_02327
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.999
HCAG_02704
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
HCAG_03007
Ribosomal protein L39.
   
 0.999
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.