STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_06712Uncharacterized protein. (564 aa)    
Predicted Functional Partners:
HCAG_03047
Centromere/microtubule-binding protein cbf5.
   
 
 0.991
HCAG_05011
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.949
HCAG_00605
H/ACA ribonucleoprotein complex subunit 3.
   
 
 0.947
HCAG_02596
TruB_N domain-containing protein.
   
 
 0.848
HCAG_04410
Uncharacterized protein.
   
   0.785
HCAG_05315
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.667
HCAG_03846
Uncharacterized protein.
   
  
 0.628
HCAG_07899
Uncharacterized protein.
   
 
  0.590
HCAG_09093
Uncharacterized protein.
   
 
  0.590
HCAG_02134
Uncharacterized protein.
      
 0.542
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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