STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_06016Uncharacterized protein. (1261 aa)    
Predicted Functional Partners:
HCAG_00511
CID domain-containing protein.
   
 0.997
HCAG_00207
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.952
HCAG_04631
U2 snRNP component HSH155.
   
 0.952
HCAG_06893
Uncharacterized protein.
   
 0.949
HCAG_03657
RRM domain-containing protein.
    
 0.946
HCAG_02755
Uncharacterized protein.
   
 
 0.928
HCAG_00407
Matrin-type domain-containing protein.
   
 0.923
HCAG_06537
Pre-mRNA splicing factor ini1.
   
 0.923
HCAG_02780
Small nuclear ribonucleoprotein G.
   
 0.920
HCAG_00910
Small nuclear ribonucleoprotein U2A.
    
 0.918
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.