STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_06243Tyrosine--tRNA ligase. (490 aa)    
Predicted Functional Partners:
HCAG_05931
Tyrosine--tRNA ligase.
    
 0.943
HCAG_04625
E2_bind domain-containing protein.
      0.870
HCAG_05953
Tryptophan synthase.
  
  
 0.809
HCAG_03017
Glycyl-tRNA synthetase 1.
  
  
 0.772
HCAG_02764
Valyl-tRNA synthetase 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.768
HCAG_06694
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.765
HCAG_07965
Uncharacterized protein.
  
  
 0.765
HCAG_03759
Uncharacterized protein.
  
  
 0.763
HCAG_01736
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.750
HCAG_06232
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.750
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.