STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_07044Uncharacterized protein. (657 aa)    
Predicted Functional Partners:
HCAG_05592
ATP-dependent RNA helicase DOB1.
   
 
 0.926
HCAG_08104
Uncharacterized protein.
   
 
 0.895
HCAG_05449
RRM domain-containing protein.
   
 
 0.618
HCAG_08172
Antiviral helicase SKI2.
   
 
 0.615
HCAG_09276
WD_REPEATS_REGION domain-containing protein.
   
 
 0.540
HCAG_00977
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
 
 0.539
HCAG_04484
RNase_PH domain-containing protein.
   
  
 0.514
HCAG_03200
RNase_PH domain-containing protein.
   
 
 0.503
HCAG_01190
Uncharacterized protein.
   
 
 0.499
HCAG_00700
zf-C3H1 domain-containing protein.
   
  
 0.487
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.