STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_07173cobW domain-containing protein. (393 aa)    
Predicted Functional Partners:
HCAG_07833
NOT2_3_5 domain-containing protein.
 
      0.871
HCAG_07793
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.737
HCAG_01672
Uncharacterized protein.
  
  
 0.661
HCAG_03649
Uncharacterized protein.
  
 
 0.597
HCAG_05379
Uncharacterized protein.
  
 
 0.591
HCAG_00616
tRNA-synt_1e domain-containing protein.
  
  
 0.477
HCAG_02357
Histidinol dehydrogenase.
   
 
 0.434
HCAG_06270
cobW domain-containing protein.
  
     0.408
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
Server load: low (30%) [HD]