STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_07581CBFD_NFYB_HMF domain-containing protein. (141 aa)    
Predicted Functional Partners:
HCAG_04018
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.993
HCAG_00082
TATA-box binding protein.
    
 
 0.986
HCAG_03418
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.884
HCAG_05716
BTB domain-containing protein.
    
 
 0.842
HCAG_08722
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.812
HCAG_08435
SGF29 C-terminal domain-containing protein.
    
 0.789
HCAG_00186
DUF3535 domain-containing protein.
    
 
 0.745
HCAG_00187
Helicase C-terminal domain-containing protein.
    
 
 0.745
HCAG_03602
Uncharacterized protein.
    
 0.742
HCAG_03662
Deacetylase sirtuin-type domain-containing protein.
 
      0.728
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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