STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_07722Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
HCAG_04525
Nsp1_C domain-containing protein.
    
 0.934
HCAG_05088
mRNA export factor elf1.
    
   0.585
HCAG_03993
Elongation factor 3.
    
   0.557
HCAG_08774
Uncharacterized protein.
    
 0.475
HCAG_02704
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.468
HCAG_01823
Uncharacterized protein.
    
 0.462
HCAG_08075
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.454
HCAG_04575
Ribosomal protein S16.
   
 
 0.430
HCAG_03649
Uncharacterized protein.
   
   0.423
HCAG_04662
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.407
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.