STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_08282DRMBL domain-containing protein. (835 aa)    
Predicted Functional Partners:
HCAG_04525
Nsp1_C domain-containing protein.
   
 
  0.932
HCAG_08281
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
 
    
 0.895
HCAG_00822
CPSF_A domain-containing protein.
   
 0.838
HCAG_04743
Uncharacterized protein.
    
 0.817
HCAG_02724
DUF3453 domain-containing protein.
   
 0.816
HCAG_08280
Methyltransf_11 domain-containing protein.
 
      0.809
HCAG_05324
Ku domain-containing protein.
    
 0.733
HCAG_02950
Ku domain-containing protein.
   
 0.721
HCAG_09100
Uncharacterized protein.
    
 0.716
HCAG_04482
Uncharacterized protein.
   
 0.700
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.