STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_08386Protein YOP1. (172 aa)    
Predicted Functional Partners:
SEY1
Protein SEY1; Cooperates with the reticulon proteins and tubule-shaping DP1 family proteins to generate and maintain the structure of the tubular endoplasmic reticulum network. Has GTPase activity, which is required for its function in ER organization; Belongs to the TRAFAC class dynamin-like GTPase superfamily. GB1/RHD3-type GTPase family. RHD3 subfamily.
    
 
 0.830
HCAG_08646
Reticulon-like protein.
    
 
 0.807
HCAG_02511
Triosephosphate isomerase.
   
  
 0.520
HCAG_04830
Uncharacterized protein.
   
 
 0.500
HCAG_07499
Zinc_ribbon_10 domain-containing protein.
    
 
 0.467
HCAG_08850
Uncharacterized protein.
      
 0.451
HCAG_03275
F-box domain-containing protein.
 
    
 0.449
HCAG_05245
Rhomboid protein 2.
      
 0.434
HCAG_02923
Uncharacterized protein.
      
 0.428
HCAG_00157
AP-1 complex subunit gamma.
 
      0.401
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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