STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_08471Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family. (375 aa)    
Predicted Functional Partners:
HCAG_05596
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.984
HCAG_00413
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.977
HCAG_01072
Nudix hydrolase domain-containing protein.
  
 
 0.975
HCAG_07922
Squalene synthetase.
  
 0.962
HCAG_01574
Uncharacterized protein.
  
 
 0.949
HCAG_04241
Uncharacterized protein.
     
 0.949
HCAG_01245
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.944
HCAG_06093
Uncharacterized protein.
   
 0.942
HCAG_01904
Uncharacterized protein.
  
 
 0.936
HCAG_08805
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.731
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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