STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_08890Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family. (433 aa)    
Predicted Functional Partners:
HCAG_00104
Acetolactate synthase.
  
 
 0.984
HCAG_04000
Dihydroxy-acid dehydratase.
   
 0.961
HCAG_04577
Dihydroxy-acid dehydratase.
   
 0.961
HCAG_05584
Mitochondrial acetolactate synthase small subunit.
  
 0.960
HCAG_07104
3-isopropylmalate dehydratase.
 
 
  
 0.918
HCAG_06628
T-complex protein 1 subunit gamma.
      
 0.608
HCAG_00595
NMO domain-containing protein.
 
      0.604
HCAG_06560
PHB domain-containing protein.
 
      0.547
HCAG_08945
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.531
HCAG_06253
Threonine dehydratase.
    
 
 0.520
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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