STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_09017Uncharacterized protein. (1289 aa)    
Predicted Functional Partners:
HCAG_07031
WD_REPEATS_REGION domain-containing protein.
   
 
 0.736
HCAG_06026
Polyadenylate-binding protein.
   
 
 0.592
HCAG_07567
J domain-containing protein.
   
   0.582
HCAG_08236
Uncharacterized protein; Belongs to the GST superfamily.
   
   0.549
HCAG_08393
ThiF domain-containing protein.
    
 
 0.475
HCAG_02998
Protein transport protein SEC61 alpha subunit.
   
    0.459
HCAG_02945
Uncharacterized protein.
      
 0.454
HCAG_05920
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.434
HCAG_09069
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.415
HCAG_09348
Helicase ATP-binding domain-containing protein.
   
 
 0.415
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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