STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCAG_09285RT_RNaseH domain-containing protein. (292 aa)    
Predicted Functional Partners:
HCAG_00136
Reverse transcriptase domain-containing protein.
 
     0.949
HCAG_07403
Uncharacterized protein.
 
     0.938
HCAG_08534
Uncharacterized protein.
 
     0.913
HCAG_03341
Integrase_H2C2 domain-containing protein.
 
     0.908
HCAG_05632
Uncharacterized protein.
 
     0.878
HCAG_07894
Chromo domain-containing protein.
 
     0.783
HCAG_08127
Integrase catalytic domain-containing protein.
 
     0.719
HCAG_01463
Integrase catalytic domain-containing protein.
 
     0.632
HCAG_02740
Uncharacterized protein.
 
    
0.630
HCAG_00917
Uncharacterized protein.
 
     0.607
Your Current Organism:
Histoplasma capsulatum NAm1
NCBI taxonomy Id: 339724
Other names: Ajellomyces capsulatus NAm1, H. capsulatum NAm1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.