STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCS84706.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (430 aa)    
Predicted Functional Partners:
OCS84703.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
OCS84704.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OCS84705.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.998
OCS84702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.661
OCS83107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.545
OCS86781.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.545
OCS84701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.491
OCS84707.1
Transcriptional regulator; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.
  
    0.478
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
 0.470
Your Current Organism:
Caryophanon tenue
NCBI taxonomy Id: 33978
Other names: ATCC 33098, C. tenue, DSM 14152, NCDO 2324, NCIB 9535, NCIB:9535, NCIMB 9535, VKM B-106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.